Dideoxycytidine

C₉H₁₃N₃O₃ — CID 24066

About Dideoxycytidine

Dideoxycytidine (PubChem CID 24066) has the molecular formula C₉H₁₃N₃O₃ and a molecular weight of 211.22 g/mol. Its IUPAC name is 4-amino-1-[(2R,5S)-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one.

Molecular Properties

• Compound Name: Dideoxycytidine
• PubChem CID: 24066
• Molecular Formula: C₉H₁₃N₃O₃
• Molecular Weight: 211.22 g/mol
• Exact Mass: 211.10
• IUPAC Name: 4-amino-1-[(2R,5S)-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one
• SMILES: Nc1ccn([C@H]2CC[C@@H](CO)O2)c(=O)n1
• InChI: InChI=1S/C9H13N3O3/c10-7-3-4-12(9(14)11-7)8-2-1-6(5-13)15-8/h3-4,6,8,13H,1-2,5H2,(H2,10,11,14)/t6-,8+/m0/s1
• InChIKey: WREGKURFCTUGRC-POYBYMJQSA-N
• XLogP: -0.50
• TPSA: 90.37 Ų
• H-Bond Donors: 2
• H-Bond Acceptors: 6
• Rotatable Bonds: 2
• Heavy Atoms: 15
• Complexity: —

Lipinski Rule of Five

Passes Rule of Five

Rule	Value
MW ≤ 500	211.22
LogP ≤ 5	-0.50
H-Bond Donors ≤ 5	2
H-Bond Acceptors ≤ 10	6

Frequently Asked Questions

What is the IUPAC name of Dideoxycytidine?

The IUPAC name of Dideoxycytidine (CID 24066) is 4-amino-1-[(2R,5S)-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one.

What is the SMILES notation for Dideoxycytidine?

The canonical SMILES for Dideoxycytidine is Nc1ccn([C@H]2CC[C@@H](CO)O2)c(=O)n1.

What is the InChIKey of Dideoxycytidine?

The InChIKey is WREGKURFCTUGRC-POYBYMJQSA-N. The full InChI is InChI=1S/C9H13N3O3/c10-7-3-4-12(9(14)11-7)8-2-1-6(5-13)15-8/h3-4,6,8,13H,1-2,5H2,(H2,10,11,14)/t6-,8+/m0/s1.

What are the key properties of Dideoxycytidine?

Dideoxycytidine has a molecular weight of 211.22 g/mol, XLogP of -0.50, 2 rotatable bonds, 2 hydrogen bond donors, and 6 hydrogen bond acceptors.

Where does this data come from?

All data for Dideoxycytidine is sourced from PubChem (CID 24066), the world's largest open chemistry database maintained by the National Library of Medicine (NIH).

Sources

• PubChem CID 24066 — identifiers, structure, computed properties (public domain)
• DrugCentral drug card 2856 — approved-drug record (CC BY-SA 4.0)

How this page is built: methodology · editorial policy & corrections.